STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ96318.1Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (346 aa)    
Predicted Functional Partners:
SJZ96331.1
ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component.
 
 0.999
SJZ96296.1
Iron complex transport system substrate-binding protein.
 
 0.998
SJZ96277.1
Hypothetical protein.
 
 0.996
SJZ36496.1
Spermidine/putrescine transport system permease protein.
     
 0.685
SJZ36540.1
Spermidine/putrescine transport system ATP-binding protein.
   
 
 0.637
SJZ76857.1
Amino acid adenylation domain-containing protein.
  
  
 0.567
SJZ44039.1
ATP-binding cassette, subfamily B.
  
  
  0.564
SJZ96900.1
Zinc transport system ATP-binding protein.
     
 0.559
SJZ96257.1
Sirohydrochlorin cobaltochelatase.
 
     0.555
SJZ96907.1
Zinc transport system permease protein.
     
 0.555
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.