STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ96974.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
SJZ96997.1
Hypothetical protein.
       0.732
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
       0.732
SJZ96950.1
Phosphoserine phosphatase.
       0.727
SJZ78295.1
Hypothetical protein.
  
     0.691
SJZ78320.1
Hypothetical protein.
  
     0.688
SJZ78264.1
Chromosome segregation ATPase.
  
     0.675
SJZ38239.1
Protein of unknown function DUF58.
  
     0.611
SJZ97043.1
DNA replication and repair protein RecO.
       0.594
SJZ66359.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
  
     0.557
SJZ90447.1
SpoIID/LytB domain protein.
  
     0.452
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.