STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ98098.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
SJZ98069.1
Cysteine desulfurase.
       0.709
SJZ98084.1
Hypothetical protein.
       0.709
SJZ98023.1
Hypothetical protein.
       0.699
SJZ98032.1
Hypothetical protein.
       0.699
SJZ98052.1
Phage holin family Hol44, holin superfamily V.
       0.699
SJZ98008.1
Hypothetical protein.
       0.639
SJZ97963.1
Hypothetical protein.
       0.586
SJZ97988.1
Hypothetical protein.
       0.586
SJZ97928.1
Hypothetical protein.
       0.550
SJZ97904.1
Hypothetical protein.
       0.514
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.