STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ98501.1Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. (345 aa)    
Predicted Functional Partners:
SJZ36820.1
Penicillin-binding protein 1A.
   
 
 0.964
SJZ83117.1
Cell division protein FtsQ.
   
 0.907
SJZ90578.1
N-acetylmuramoyl-L-alanine amidase.
  
 0.840
SJZ61173.1
Penicillin-binding protein 2.
  
 0.746
SJZ61570.1
Peptidoglycan glycosyltransferase.
  
 0.746
SJZ83205.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
  
 0.746
SJZ98519.1
Calcineurin-like phosphoesterase superfamily domain-containing protein.
       0.723
SJZ98541.1
Hypothetical protein.
       0.723
SJZ61157.1
Rod shape determining protein RodA; Belongs to the SEDS family.
   
 0.715
SJZ61602.1
Cell division protein FtsW, lipid II flippase.
   
 0.715
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
Server load: low (24%) [HD]