STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA00994.1Hypothetical protein. (163 aa)    
Predicted Functional Partners:
SKA00976.1
ABC-2 type transport system ATP-binding protein.
       0.463
SKA01012.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.451
SKA01031.1
Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains.
       0.451
SKA00937.1
Transcriptional regulator, AsnC family.
       0.426
SKA00951.1
RNA polymerase, alpha chain C terminal domain.
       0.426
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.