STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA06279.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
SKA06262.1
Hypothetical protein.
       0.773
SKA06294.1
Hypothetical protein.
       0.757
SKA06309.1
Hypothetical protein.
       0.757
SKA06229.1
Hypothetical protein.
       0.732
SKA06325.1
Hypothetical protein.
       0.726
SKA06345.1
Hypothetical protein.
       0.641
SKA06365.1
Hypothetical protein.
       0.628
SKA06377.1
Hypothetical protein.
       0.607
SKA06212.1
Hypothetical protein.
       0.589
SKA06384.1
Hypothetical protein.
       0.437
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.