STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA06384.1Hypothetical protein. (72 aa)    
Predicted Functional Partners:
SKA06401.1
Hypothetical protein.
       0.752
SKA06412.1
Hypothetical protein.
       0.746
SKA06424.1
Hypothetical protein.
       0.702
SKA06440.1
Hypothetical protein.
       0.702
SKA06462.1
Hypothetical protein.
       0.682
SKA06474.1
Hypothetical protein.
       0.643
SKA06486.1
Hypothetical protein.
       0.622
SKA06498.1
Hypothetical protein.
       0.597
SKA06529.1
Hypothetical protein.
       0.597
SKA06377.1
Hypothetical protein.
       0.543
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.