STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA07556.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
SKA07506.1
Hypothetical protein.
       0.773
SKA07524.1
DNA replication protein DnaC.
       0.773
SKA07539.1
Hypothetical protein.
       0.773
SKA07584.1
Hypothetical protein.
       0.773
SKA07600.1
Hypothetical protein.
       0.732
SKA07620.1
Hypothetical protein.
       0.732
SKA07476.1
Hypothetical protein.
       0.661
SKA07500.1
Hypothetical protein.
       0.661
Your Current Organism:
Eubacterium ruminantium
NCBI taxonomy Id: 42322
Other names: ATCC 17233, DSM 20704
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.