STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103696079Nuclear poly(A) polymerase 4-like. (737 aa)    
Predicted Functional Partners:
LOC103695637
Zinc finger CCCH domain-containing protein 45-like isoform X2.
   
 0.995
LOC103713836
Zinc finger CCCH domain-containing protein 45-like.
   
 0.995
LOC103705537
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.957
LOC103718100
Cleavage stimulation factor subunit 77 isoform X1.
    
 0.950
LOC103709595
Symplekin isoform X1.
   
 0.933
LOC103713953
Uncharacterized protein LOC103713953 isoform X1.
   
 0.928
LOC103708691
Cleavage and polyadenylation specificity factor subunit 1 isoform X1.
   
 0.893
LOC103700993
FIP1[III]-like protein.
   
 0.888
LOC103701299
Cleavage stimulating factor 64-like isoform X1.
    
 0.888
LOC103703217
Cleavage stimulating factor 64-like isoform X1.
    
 0.888
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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