STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
LOC103696578Katanin p80 WD40 repeat-containing subunit B1 homolog; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays; Belongs to the WD repeat KATNB1 family. (846 aa)    
Predicted Functional Partners:
LOC103701169
Katanin p60 ATPase-containing subunit A-like 2 isoform X1.
   
 
 0.762
LOC103709449
Katanin p60 ATPase-containing subunit A-like 2.
   
 
 0.762
LOC103721035
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.762
LOC103722716
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.762
LOC103710415
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
   
  
 0.497
LOC103704037
26S proteasome regulatory subunit 8 homolog A; Belongs to the AAA ATPase family.
   
 
 0.495
LOC103708800
26S proteasome regulatory subunit 8 homolog A-like; Belongs to the AAA ATPase family.
   
 
 0.495
LOC103698889
Glycerol kinase-like isoform X2.
    
 
 0.480
LOC103700800
26S proteasome regulatory subunit 7A; Belongs to the AAA ATPase family.
    
 
 0.480
LOC103707093
FGGY carbohydrate kinase domain-containing protein isoform X1.
    
 
 0.480
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.