STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103696666Uncharacterized protein At2g27730, mitochondrial. (116 aa)    
Predicted Functional Partners:
LOC103695473
Uncharacterized protein LOC103695473.
   
   0.897
LOC103713532
Uncharacterized protein LOC103713532.
    
   0.893
nad2
NADH dehydrogenase subunit 2.
    
   0.893
LOC103709911
Uncharacterized protein LOC103709911.
   
   0.880
LOC103712042
Uncharacterized protein LOC103712042.
   
   0.878
LOC103706380
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
   0.874
LOC103719079
Uncharacterized protein LOC103719079.
   
   0.874
LOC103718147
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.
   
   0.873
LOC103701613
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B.
   
   0.869
LOC103695479
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6.
    
   0.868
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.