STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103696664Probable glutamate carboxypeptidase LAMP1. (668 aa)    
Predicted Functional Partners:
LOC103722490
LOW QUALITY PROTEIN: photosystem II stability/assembly factor HCF136, chloroplastic-like.
     
 0.623
LOC103712614
Cellulose synthase-like protein D5; Belongs to the glycosyltransferase 2 family.
   
 
  0.592
LOC103713100
Oxysterol-binding protein-related protein 4C-like isoform X1; Belongs to the OSBP family.
   
 
  0.592
LOC103709752
Carboxypeptidase SOL1.
     
 0.525
LOC103703875
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.499
LOC103715635
Uncharacterized protein LOC103715635.
     
 0.499
LOC103719893
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.499
LOC103696358
Protein LOL2.
     
 0.498
LOC103701672
Calcium sensing receptor, chloroplastic.
     
 0.483
LOC103706378
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
     
 0.483
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.