STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103696693Uncharacterized protein LOC103696693 isoform X1. (1494 aa)    
Predicted Functional Partners:
LOC103722070
Chromatin modification-related protein MEAF6-like.
    
 0.792
LOC103711533
LOW QUALITY PROTEIN: chromatin modification-related protein MEAF6-like.
    
 0.792
LOC103721204
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.580
LOC103721722
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.580
LOC103720976
Uncharacterized protein LOC103720976 isoform X1.
  
     0.513
LOC103710169
Protein SABRE isoform X1.
  
    0.503
LOC103705599
DDT domain-containing protein PTM isoform X1.
  
     0.493
LOC103710484
Protein GAMETE EXPRESSED 2.
  
     0.489
LOC103710741
LOW QUALITY PROTEIN: uncharacterized protein LOC103710741.
  
     0.485
LOC103716854
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
     0.483
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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