Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC103696810 | LOC103709451 | A0A2H3X153 | A0A2H3Y3S9 | E3 ubiquitin-protein ligase SINAT2-like isoform X1. | Calcyclin-binding protein-like. | 0.513 |
LOC103696810 | LOC103709890 | A0A2H3X153 | A0A2H3Y595 | E3 ubiquitin-protein ligase SINAT2-like isoform X1. | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | 0.606 |
LOC103696810 | LOC103716533 | A0A2H3X153 | A0A2H3YSD5 | E3 ubiquitin-protein ligase SINAT2-like isoform X1. | tyrosine--tRNA ligase 1, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.431 |
LOC103696810 | LOC103722468 | A0A2H3X153 | A0A2H3ZBB0 | E3 ubiquitin-protein ligase SINAT2-like isoform X1. | Calcyclin-binding protein-like. | 0.513 |
LOC103709451 | LOC103696810 | A0A2H3Y3S9 | A0A2H3X153 | Calcyclin-binding protein-like. | E3 ubiquitin-protein ligase SINAT2-like isoform X1. | 0.513 |
LOC103709890 | LOC103696810 | A0A2H3Y595 | A0A2H3X153 | Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. | E3 ubiquitin-protein ligase SINAT2-like isoform X1. | 0.606 |
LOC103716533 | LOC103696810 | A0A2H3YSD5 | A0A2H3X153 | tyrosine--tRNA ligase 1, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family. | E3 ubiquitin-protein ligase SINAT2-like isoform X1. | 0.431 |
LOC103722468 | LOC103696810 | A0A2H3ZBB0 | A0A2H3X153 | Calcyclin-binding protein-like. | E3 ubiquitin-protein ligase SINAT2-like isoform X1. | 0.513 |