STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103697103Probable pyridoxal 5'-phosphate synthase subunit PDX1.1; Belongs to the PdxS/SNZ family. (319 aa)    
Predicted Functional Partners:
LOC103708291
Probable pyridoxal 5'-phosphate synthase subunit PDX2.
 
 0.999
LOC103701790
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.
  
 
 0.961
LOC103712918
Pyridoxal kinase isoform X1.
   
 0.935
LOC103700452
Inorganic pyrophosphatase 2-like.
     
 0.927
LOC103711193
Inorganic pyrophosphatase 2.
     
 0.927
LOC103714219
Inorganic pyrophosphatase 2-like.
     
 0.927
LOC103721826
Inorganic pyrophosphatase 2-like.
     
 0.927
LOC103699233
Inorganic pyrophosphatase 2-like.
     
 0.925
LOC103695453
LOW QUALITY PROTEIN: pyridoxine/pyridoxamine 5'-phosphate oxidase 2.
     
 0.901
LOC103697943
Probable pyridoxal 5'-phosphate synthase subunit PDX1.1; Belongs to the PdxS/SNZ family.
  
  
 
0.900
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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