STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103697132Exosome complex component RRP45A-like. (448 aa)    
Predicted Functional Partners:
LOC103696307
Exosome complex component RRP42.
  
0.996
LOC103713483
Exosome complex component RRP41 homolog.
  
 0.995
LOC103719877
Exosome complex component RRP43 isoform X1.
  
0.995
LOC103722158
Nuclear nucleic acid-binding protein C1D.
   
 0.994
LOC103706955
Exosome complex component CSL4 isoform X1.
   
 0.994
LOC103719434
Putative exosome complex component rrp40 isoform X1.
   
 0.986
LOC103715853
Putative exosome complex component rrp40 isoform X1.
   
 0.986
LOC103704708
Exosome complex exonuclease RRP46 homolog.
   
 0.984
LOC108511475
Exosome complex exonuclease RRP46 homolog.
   
 0.984
LOC103716322
Uncharacterized protein At3g06530.
   
 0.982
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.