STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103697144Cycloartenol synthase-like. (210 aa)    
Predicted Functional Partners:
LOC103715695
Cycloartenol Synthase-like isoform X1.
 
     0.951
LOC103712248
Cycloartenol synthase-like.
 
     0.949
LOC103708119
Obtusifoliol 14-alpha demethylase-like; Belongs to the cytochrome P450 family.
  
 0.928
LOC103697889
LOW QUALITY PROTEIN: obtusifoliol 14-alpha demethylase-like; Belongs to the cytochrome P450 family.
  
 0.925
LOC103713659
Ergosterol biosynthetic protein 28 isoform X1.
   
 
 0.864
LOC103707523
Squalene monooxygenase.
  
 
 0.862
LOC103713674
Squalene monooxygenase-like.
  
 
 0.862
LOC103718827
delta(7)-sterol-C5(6)-desaturase-like; Belongs to the sterol desaturase family.
   
 
 0.822
LOC103723275
delta(7)-sterol-C5(6)-desaturase-like; Belongs to the sterol desaturase family.
   
 
 0.822
LOC103705932
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.
   
 
 0.740
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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