STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103697220Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like isoform X1. (618 aa)    
Predicted Functional Partners:
LOC103695585
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 0.968
LOC103701000
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 0.960
LOC103720657
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
    
 0.960
LOC103714720
Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like isoform X1.
  
  
 
0.904
LOC103720128
Transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like isoform X1.
  
  
 
0.901
LOC103701852
DELLA protein SLR1-like; Belongs to the GRAS family.
    
 0.749
LOC103721390
DELLA protein SLR1; Belongs to the GRAS family.
    
 0.749
LOC103697278
DELLA protein GAI-like; Belongs to the GRAS family.
    
 0.702
LOC103721072
DELLA protein RHT-1-like; Belongs to the GRAS family.
    
 0.702
LOC103718513
E3 ubiquitin-protein ligase COP1 isoform X1.
    
 
 0.618
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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