STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103697987Cyclase-like protein 3. (274 aa)    
Predicted Functional Partners:
LOC103702642
Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.
    
 0.482
LOC103704751
Monooxygenase 1-like.
    
 0.482
LOC103705684
Uncharacterized protein LOC103705684 isoform X1.
    
 0.482
LOC103707523
Squalene monooxygenase.
    
 0.482
LOC103708505
Probable plastid-lipid-associated protein 10, chloroplastic isoform X1.
    
 0.482
LOC103708811
Uncharacterized protein LOC103708811 isoform X1.
    
 0.482
LOC103711272
E3 ubiquitin-protein ligase RNF170.
    
 0.482
LOC103712512
Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin.
    
 0.482
LOC103713602
Monooxygenase 2.
    
 0.482
LOC103713674
Squalene monooxygenase-like.
    
 0.482
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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