STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103698307Uncharacterized protein LOC103698307. (233 aa)    
Predicted Functional Partners:
LOC103713534
Uncharacterized protein LOC103713534 isoform X1.
      
 0.437
LOC103706022
Proteasome subunit beta; Belongs to the peptidase T1B family.
      
 0.416
LOC103706988
Probable voltage-gated potassium channel subunit beta.
      
 0.416
LOC103714896
Probable voltage-gated potassium channel subunit beta.
      
 0.416
LOC103721761
Proteasome subunit beta; Belongs to the peptidase T1B family.
      
 0.416
LOC103712683
Transcription factor bHLH149-like.
      
 0.412
LOC103713240
Transcription factor IBH1-like 1.
      
 0.412
LOC103719003
Uncharacterized protein LOC103719003.
      
 0.408
LOC103722988
Uncharacterized protein LOC103722988.
      
 0.408
LOC103724053
F-box protein SKIP5.
      
 0.402
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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