STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103698434ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like. (195 aa)    
Predicted Functional Partners:
LOC103697332
ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic; Belongs to the ClpA/ClpB family.
 
      0.870
LOC103701937
Heat shock 70 kDa protein 17.
  
 
 0.616
LOC103698310
ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like.
  
 
 0.587
LOC103723618
ATP-dependent Clp protease adapter protein CLPS1, chloroplastic.
  
 
 0.587
LOC103724139
ATP-dependent Clp protease adapter protein CLPS1, chloroplastic-like.
  
 
 0.587
LOC103704858
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.571
LOC103696008
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
 0.568
LOC103708233
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
 0.555
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
  
 
 0.551
LOC103714513
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.528
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.