STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103698460Aspartyl protease family protein 2-like; Belongs to the peptidase A1 family. (569 aa)    
Predicted Functional Partners:
LOC103698472
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
    
 
 0.519
LOC103705913
Cyclin-dependent kinase B1-1-like isoform X1; Belongs to the protein kinase superfamily.
   
  
 0.430
LOC103717872
Cyclin-dependent kinase B1-1; Belongs to the protein kinase superfamily.
   
  
 0.430
LOC103709904
S-adenosylmethionine decarboxylase proenzyme.
      
 0.412
LOC103723001
S-adenosylmethionine decarboxylase proenzyme.
      
 0.412
LOC103707326
Low-temperature-induced cysteine proteinase-like; Belongs to the peptidase C1 family.
   
 0.409
LOC103711928
Oryzain alpha chain-like; Belongs to the peptidase C1 family.
   
 0.409
LOC103712059
Oryzain alpha chain-like; Belongs to the peptidase C1 family.
   
 0.409
LOC103712021
Low-temperature-induced cysteine proteinase; Belongs to the peptidase C1 family.
   
 0.409
LOC103714409
Oryzain alpha chain-like isoform X1; Belongs to the peptidase C1 family.
   
 0.409
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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