STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10369864154S ribosomal protein L12, mitochondrial. (106 aa)    
Predicted Functional Partners:
LOC103715470
Uncharacterized protein LOC103715470.
  
 
 0.979
LOC103712707
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.964
LOC103706747
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.948
LOC103712849
DNA-directed RNA polymerases I and III subunit rpac1.
  
 
 0.948
rpl36
50S ribosomal protein L36, chloroplastic.
  
 
 0.948
LOC103702956
Uncharacterized protein LOC103702956.
  
 
 0.947
LOC103707061
Uncharacterized protein LOC103707061.
  
 
 0.947
LOC103703492
30S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.946
LOC103712302
30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.946
LOC103698850
50S ribosomal protein L9, chloroplastic.
   
 
 0.945
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.