STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103699049Tryptophan synthase alpha chain-like isoform X1; Belongs to the TrpA family. (104 aa)    
Predicted Functional Partners:
LOC103709028
N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic-like.
 
 
 0.960
LOC103703474
Tryptophan synthase.
 
 0.957
LOC103723106
Tryptophan synthase.
 
 0.957
LOC103712731
Uncharacterized protein LOC103712731.
  
 0.930
LOC103722473
Indole-3-glycerol phosphate synthase, chloroplastic-like.
 
 
 0.928
LOC103720693
Indole-3-glycerol phosphate synthase, chloroplastic-like isoform X1.
 
 
 0.927
LOC103724180
Anthranilate phosphoribosyltransferase, chloroplastic-like isoform X1.
 
 
 0.916
LOC103723128
Anthranilate phosphoribosyltransferase, chloroplastic-like isoform X1.
 
 
 0.915
LOC103713292
Anthranilate synthase beta subunit 2, chloroplastic-like.
 
 
 0.870
LOC103711108
Anthranilate synthase beta subunit 2, chloroplastic-like isoform X1.
 
 
 0.868
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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