STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103699703Pyruvate decarboxylase 1-like. (271 aa)    
Predicted Functional Partners:
LOC103699316
Pyruvate decarboxylase 2-like.
 
     0.948
LOC103723389
Serine--glyoxylate aminotransferase isoform X1.
    
 0.655
LOC103699600
Pyruvate decarboxylase 2-like.
 
     0.647
LOC103717358
Uncharacterized protein LOC103717358.
   
  
 0.613
LOC103711034
Carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic-like.
    
 0.611
LOC103716821
Isocitrate lyase.
    
 0.611
LOC103716226
Uncharacterized protein LOC103716226.
    
 0.611
LOC103712466
Alcohol dehydrogenase-like 6.
     
 0.543
LOC103701342
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.539
LOC103717123
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.539
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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