STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103700305Polypyrimidine tract-binding protein homolog 1-like isoform X1. (455 aa)    
Predicted Functional Partners:
LOC103721496
Nuclear cap-binding protein subunit 2.
    
 0.699
LOC103701345
DNA-directed RNA polymerase subunit 10-like protein.
   
 
  0.593
LOC103719943
DNA-directed RNA polymerase subunit 10-like protein.
   
 
  0.593
LOC103701104
G-rich sequence factor 1-like isoform X1.
   
 0.591
LOC103723237
Heterogeneous nuclear ribonucleoprotein F-like isoform X1.
   
 0.591
LOC103702804
Transcription initiation factor IIF subunit beta-like.
   
 
  0.576
LOC103708197
Transcription initiation factor IIF subunit beta-like.
   
 
  0.576
LOC103707972
Serine/arginine-rich splicing factor SC35-like.
   
 0.575
LOC103716111
Serine/arginine-rich splicing factor SC35.
   
 0.575
LOC103707294
Nuclear cap-binding protein subunit 1-like isoform X1.
   
 0.565
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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