STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103700508Nodulin-related protein 1-like. (132 aa)    
Predicted Functional Partners:
LOC103713612
Trigger factor-like protein TIG, Chloroplastic isoform X1.
    
 
 0.854
LOC103705847
LOW QUALITY PROTEIN: histidinol-phosphate aminotransferase, chloroplastic-like.
    
 0.740
LOC103723389
Serine--glyoxylate aminotransferase isoform X1.
     
 0.688
LOC103712887
Uncharacterized protein LOC103712887.
     
 0.651
LOC103719564
Uncharacterized protein LOC103719564.
     
 0.651
LOC103719918
Phosphoserine aminotransferase 2, chloroplastic-like.
     
 0.651
LOC103719919
Phosphoserine aminotransferase.
     
 0.651
LOC103697974
Probable AMP deaminase.
   
 
  0.635
LOC103706702
Uncharacterized protein LOC103706702.
   
 
  0.635
LOC103714663
Adenosine deaminase-like protein isoform X1.
   
 
  0.634
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.