STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103700724Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (472 aa)    
Predicted Functional Partners:
LOC103723389
Serine--glyoxylate aminotransferase isoform X1.
  
 0.968
LOC103701342
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.955
LOC103701633
Aldehyde dehydrogenase family 2 member B7, mitochondrial; Belongs to the aldehyde dehydrogenase family.
 
 0.955
LOC103709342
Aldehyde dehydrogenase family 7 member A1 isoform X1; Belongs to the aldehyde dehydrogenase family.
 
 0.955
LOC103710071
Aldehyde dehydrogenase family 2 member B7, mitochondrial-like; Belongs to the aldehyde dehydrogenase family.
 
 0.955
LOC103710055
Aldehyde dehydrogenase family 2 member B7, mitochondrial-like; Belongs to the aldehyde dehydrogenase family.
 
 0.955
LOC103717123
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.955
LOC103722608
Probable sarcosine oxidase.
  
 
 0.947
LOC103714115
Probable sarcosine oxidase.
  
 
 0.947
LOC103715905
Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic-like isoform X1.
    
 0.944
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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