STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103701235Glycine-rich cell wall structural protein 2-like. (287 aa)    
Predicted Functional Partners:
LOC103702912
Uncharacterized protein LOC103702912.
    
 0.860
LOC103722396
Uncharacterized protein LOC103722396 isoform X1.
    
 0.814
LOC103721013
Ribonucleases P/MRP protein subunit POP1 isoform X1.
    
 0.746
LOC103719415
Uncharacterized protein LOC103719415.
     
 0.640
LOC103704260
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.583
LOC103707630
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.583
LOC103698520
Uncharacterized protein LOC103698519.
   
 0.583
LOC103716154
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
     
 0.516
LOC103700527
40S ribosomal protein S9-2; Belongs to the universal ribosomal protein uS4 family.
   
 
  0.467
LOC103703295
40S ribosomal protein S9.
   
 
  0.467
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.