STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103701463Pumilio homolog 5-like isoform X1. (1016 aa)    
Predicted Functional Partners:
LOC103712000
Uncharacterized protein LOC103712000.
    
 
 0.582
LOC103717196
Cytochrome c oxidase copper chaperone 1-like.
    
 
 0.582
LOC103715427
Mitochondrial import receptor subunit TOM9-2-like.
    
 
 0.467
LOC103699147
acyl-CoA-binding domain-containing protein 6-like.
   
   0.450
LOC103718629
acyl-CoA-binding domain-containing protein 6.
   
   0.450
LOC103715112
acyl-CoA-binding domain-containing protein 6-like.
   
   0.450
LOC103707287
acyl-CoA-binding domain-containing protein 6 isoform X1.
   
   0.450
LOC113462997
Serine/threonine-protein kinase-like protein CCR4.
    
 
 0.436
LOC103702625
Pumilio homolog 23 isoform X1.
      
 0.431
LOC103721676
Pumilio homolog 24.
    
 
 0.431
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.