LOC103701434 protein (Phoenix dactylifera) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

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gene co-occurrence

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Score

LOC103701434

Protein FAR1-RELATED SEQUENCE 5-like. (727 aa)

Predicted Functional Partners:

LOC103722070

0.640

LOC103711533

0.640

LOC103721204

0.623

LOC103721722

0.623

LOC103720534

0.602

LOC103714622

0.543

LOC103702169

0.535

LOC103713576

0.535

LOC103704145

0.532

LOC103704225

0.530

Your Current Organism:

Phoenix dactylifera

NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103701434	LOC103702169	A0A2H3XCK0	A0A2H3XEQ5	Protein FAR1-RELATED SEQUENCE 5-like.	Uncharacterized protein LOC103702169 isoform X1.	0.535
LOC103701434	LOC103704145	A0A2H3XCK0	A0A2H3XLE0	Protein FAR1-RELATED SEQUENCE 5-like.	Uncharacterized protein LOC103704145.	0.532
LOC103701434	LOC103704225	A0A2H3XCK0	A0A2H3ZN62	Protein FAR1-RELATED SEQUENCE 5-like.	Uncharacterized protein LOC103704225 isoform X1.	0.530
LOC103701434	LOC103711533	A0A2H3XCK0	A0A2H3ZSK2	Protein FAR1-RELATED SEQUENCE 5-like.	LOW QUALITY PROTEIN: chromatin modification-related protein MEAF6-like.	0.640
LOC103701434	LOC103713576	A0A2H3XCK0	A0A3Q0I7G2	Protein FAR1-RELATED SEQUENCE 5-like.	Transcription initiation factor TFIID subunit 6-like.	0.535
LOC103701434	LOC103714622	A0A2H3XCK0	A0A2H3YKK1	Protein FAR1-RELATED SEQUENCE 5-like.	Uncharacterized protein LOC103714622 isoform X1.	0.543
LOC103701434	LOC103720534	A0A2H3XCK0	A0A2H3ZYL5	Protein FAR1-RELATED SEQUENCE 5-like.	SWR1-complex protein 4.	0.602
LOC103701434	LOC103721204	A0A2H3XCK0	A0A2H3Z801	Protein FAR1-RELATED SEQUENCE 5-like.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.623
LOC103701434	LOC103721722	A0A2H3XCK0	A0A2H3Z9N3	Protein FAR1-RELATED SEQUENCE 5-like.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.623
LOC103701434	LOC103722070	A0A2H3XCK0	A0A2H3ZA63	Protein FAR1-RELATED SEQUENCE 5-like.	Chromatin modification-related protein MEAF6-like.	0.640
LOC103702169	LOC103701434	A0A2H3XEQ5	A0A2H3XCK0	Uncharacterized protein LOC103702169 isoform X1.	Protein FAR1-RELATED SEQUENCE 5-like.	0.535
LOC103702169	LOC103704145	A0A2H3XEQ5	A0A2H3XLE0	Uncharacterized protein LOC103702169 isoform X1.	Uncharacterized protein LOC103704145.	0.537
LOC103704145	LOC103701434	A0A2H3XLE0	A0A2H3XCK0	Uncharacterized protein LOC103704145.	Protein FAR1-RELATED SEQUENCE 5-like.	0.532
LOC103704145	LOC103702169	A0A2H3XLE0	A0A2H3XEQ5	Uncharacterized protein LOC103704145.	Uncharacterized protein LOC103702169 isoform X1.	0.537
LOC103704145	LOC103704225	A0A2H3XLE0	A0A2H3ZN62	Uncharacterized protein LOC103704145.	Uncharacterized protein LOC103704225 isoform X1.	0.536
LOC103704145	LOC103714622	A0A2H3XLE0	A0A2H3YKK1	Uncharacterized protein LOC103704145.	Uncharacterized protein LOC103714622 isoform X1.	0.536
LOC103704225	LOC103701434	A0A2H3ZN62	A0A2H3XCK0	Uncharacterized protein LOC103704225 isoform X1.	Protein FAR1-RELATED SEQUENCE 5-like.	0.530
LOC103704225	LOC103704145	A0A2H3ZN62	A0A2H3XLE0	Uncharacterized protein LOC103704225 isoform X1.	Uncharacterized protein LOC103704145.	0.536
LOC103711533	LOC103701434	A0A2H3ZSK2	A0A2H3XCK0	LOW QUALITY PROTEIN: chromatin modification-related protein MEAF6-like.	Protein FAR1-RELATED SEQUENCE 5-like.	0.640
LOC103711533	LOC103720534	A0A2H3ZSK2	A0A2H3ZYL5	LOW QUALITY PROTEIN: chromatin modification-related protein MEAF6-like.	SWR1-complex protein 4.	0.969

page 1 of 3

Network Stats

number of nodes:

11

number of edges:

40

average node degree:

7.27

avg. local clustering coefficient:

0.889

expected number of edges:

13

PPI enrichment p-value:

6.25e-10

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0009132

Nucleoside diphosphate metabolic process

7 of 58

2.45

6.02

4.55e-13

GO:0072528

Pyrimidine-containing compound biosynthetic process

5 of 28

2.62

4.81

5.53e-10

GO:0009142

Nucleoside triphosphate biosynthetic process

5 of 29

2.6

4.78

6.02e-10

GO:0009141

Nucleoside triphosphate metabolic process

6 of 73

2.28

4.67

1.67e-10

GO:0090407

Organophosphate biosynthetic process

9 of 281

1.87

4.45

4.55e-13

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016776

Phosphotransferase activity, phosphate group as acceptor

6 of 25

2.74

6.13

1.82e-12

GO:0019205

Nucleobase-containing compound kinase activity

6 of 29

2.68

6.04

2.01e-12

GO:0004550

Nucleoside diphosphate kinase activity

3 of 4

3.24

3.23

1.41e-06

GO:0004017

Adenylate kinase activity

3 of 4

3.24

3.23

1.41e-06

GO:0016772

Transferase activity, transferring phosphorus-containing groups

7 of 765

1.32

1.68

2.39e-06

(more ...)

Reference Publications (PubMed)

publication

(year) title

count in network

strength

signal

false discovery rate

PMID:36277867

(2022) Cold-induced denaturation of muscle proteins in hairtail (Trichiurus lepturus) during storage: Physicochemical and label-free based proteomics analyses.

3 of 52

2.12

1.26

0.0040

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:5678

Purine metabolism

9 of 40

2.72

9.69

3.16e-20

CL:5732

Mixed, incl. CTP metabolic process, and Adenylate kinase activity

7 of 13

3.09

9.1

9.18e-18

CL:5673

Mixed, incl. Purine metabolism, and Metabolism of nucleotides

10 of 157

2.17

7.13

1.42e-18

CL:5748

Adenylate kinase activity, and ATP cone domain

4 of 5

3.27

4.99

8.16e-10

CL:5734

Nucleoside diphosphate kinase, and Purine ribonucleoside bisphosphate metabolic process

2 of 5

2.97

1.63

0.0011

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

pvm00230

Purine metabolism

9 of 76

2.44

8.5

2.35e-19

pvm00730

Thiamine metabolism

5 of 10

3.06

6.48

9.96e-13

pvm00240

Pyrimidine metabolism

5 of 36

2.51

5.02

1.24e-10

pvm00983

Drug metabolism - other enzymes

4 of 49

2.28

3.42

1.40e-07

pvm01100

Metabolic pathways

10 of 991

1.37

2.44

3.87e-12

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-499943

Interconversion of nucleotide di- and triphosphates

5 of 21

2.74

4.93

4.73e-10

MAP-15869

Metabolism of nucleotides

6 of 104

2.12

4.02

1.80e-09

MAP-1430728

Metabolism

7 of 2301

0.85

0.61

0.0055

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0418

Kinase

7 of 411

1.59

2.59

2.75e-08

KW-0547

Nucleotide-binding

6 of 685

1.31

1.48

2.31e-05

KW-0067

ATP-binding

5 of 552

1.32

1.33

0.00015

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF13207

AAA domain

3 of 5

3.14

2.93

4.83e-06

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR034907

Nucleoside diphosphate kinase-like domain

3 of 3

3.36

2.93

5.10e-06

IPR001564

Nucleoside diphosphate kinase

3 of 3

3.36

2.93

5.10e-06

IPR036850

Nucleoside diphosphate kinase-like domain superfamily

3 of 5

3.14

2.92

5.10e-06

IPR033690

Adenylate kinase, conserved site

3 of 5

3.14

2.92

5.10e-06

IPR000850

Adenylate kinase/UMP-CMP kinase

3 of 6

3.06

2.91

5.10e-06

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00562

These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.

3 of 3

3.36

3.43

6.44e-07

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