STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103701584Nuclear intron maturase 1, mitochondrial. (700 aa)    
Predicted Functional Partners:
LOC103712774
Nuclear intron maturase 4, mitochondrial.
  
  
 0.736
LOC103712607
Nuclear intron maturase 3, mitochondrial.
  
   
 0.673
matR
Maturase.
      
 0.560
LOC103707645
LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g74900, mitochondrial.
      
 0.559
LOC103698269
Transcription termination factor MTERF15, mitochondrial.
      
 0.548
LOC103717529
Pentatricopeptide repeat-containing protein At1g06710, mitochondrial isoform X2.
   
  
 0.536
LOC103721456
Regulator of chromosome condensation-like.
     
 0.529
LOC103723438
RCC1 domain-containing protein RUG3, mitochondrial-like isoform X1.
     
 0.529
LOC103697896
LOW QUALITY PROTEIN: protein WHAT'S THIS FACTOR 1.
      
 0.527
LOC103716631
DNA repair RAD52-like protein 1, mitochondrial.
      
 0.526
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.