STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103701667Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase. (311 aa)    
Predicted Functional Partners:
LOC103712378
Histidine biosynthesis bifunctional protein hisIE, chloroplastic.
  
 
 0.998
LOC103715056
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. In the C-terminal section; belongs to the HisA/HisF family.
  
 
 0.998
LOC103715947
Imidazoleglycerol-phosphate dehydratase; Belongs to the imidazoleglycerol-phosphate dehydratase family.
  
 
 0.989
LOC103710491
LOW QUALITY PROTEIN: histidinol dehydrogenase, chloroplastic; Belongs to the histidinol dehydrogenase family.
  
 
 0.976
LOC103702806
ATP phosphoribosyltransferase, chloroplastic-like.
  
 
 0.975
LOC103722185
ATP phosphoribosyltransferase, chloroplastic-like isoform X1.
  
 
 0.975
LOC103717783
ATP-dependent helicase rhp16.
  
 
 0.975
LOC103705847
LOW QUALITY PROTEIN: histidinol-phosphate aminotransferase, chloroplastic-like.
  
  
 0.972
LOC103708258
Phosphoserine phosphatase, chloroplastic.
  
  
 0.913
LOC103697718
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
  
  
 
0.900
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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