STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103702382Phosphoglycolate phosphatase. (310 aa)    
Predicted Functional Partners:
LOC103721138
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.942
LOC103719601
Glycerate dehydrogenase-like; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.942
LOC103699022
Peroxisomal (S)-2-hydroxy-acid oxidase-like.
   
 
 0.922
LOC103705751
Peroxisomal (S)-2-hydroxy-acid oxidase GLO5.
   
 
 0.922
LOC103697143
Peroxisomal (S)-2-hydroxy-acid oxidase-like isoform X1.
   
 
 0.922
LOC103714819
Peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like.
   
 
 0.920
LOC103722957
(S)-2-hydroxy-acid oxidase GLO1-like.
   
 
 0.920
LOC103702800
Glyoxylate/hydroxypyruvate reductase HPR3-like; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.918
LOC103702799
Glyoxylate/hydroxypyruvate reductase HPR3-like; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.918
LOC103717112
Ribulose bisphosphate carboxylase small chain; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO small chain family.
   
 
 0.918
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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