STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103702511Protein DEFECTIVE IN MERISTEM SILENCING 3 isoform X1. (405 aa)    
Predicted Functional Partners:
LOC103710203
Protein CHROMATIN REMODELING 35-like.
    
 
 0.937
LOC103696435
SNF2 domain-containing protein CLASSY 1-like.
    
 
 0.727
LOC103723294
LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit 1-like.
    
 
 0.722
LOC103714505
DNA-directed RNA polymerase V subunit 1-like.
    
 
 0.690
LOC103710769
SNF2 domain-containing protein CLASSY 4-like.
    
 
 0.616
LOC103716854
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.581
LOC103696096
DNA repair and recombination protein RAD54 isoform X1.
    
 
 0.578
LOC103717054
LOW QUALITY PROTEIN: protein argonaute 16-like.
      
 0.570
LOC103710162
Protein RNA-directed DNA methylation 3.
      
 0.569
LOC103724025
DNA (Cytosine-5)-methyltransferase DRM2-like.
      
 0.569
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (26%) [HD]