STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103702681Uncharacterized protein LOC103702681. (1501 aa)    
Predicted Functional Partners:
LOC103707767
Pentatricopeptide repeat-containing protein At1g05670, mitochondrial.
      
 0.513
LOC103708657
26S proteasome non-ATPase regulatory subunit 11 homolog.
    
   0.442
LOC103710835
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
    
   0.442
LOC103716208
26S proteasome non-ATPase regulatory subunit 8 homolog A.
    
   0.442
LOC103708823
Pentatricopeptide repeat-containing protein At4g32430, mitochondrial.
      
 0.424
LOC103709667
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
      
 0.422
LOC103723780
Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial isoform X1.
    
 
 0.420
LOC103700962
Pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like.
      
 0.412
LOC103719157
Pentatricopeptide repeat-containing protein At3g53360, mitochondrial.
      
 0.412
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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