STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103702718Protein AE7-like 1. (157 aa)    
Predicted Functional Partners:
LOC103721891
MMS19 nucleotide excision repair protein homolog.
    
 0.979
LOC103718010
Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.
    
 0.965
LOC103720025
Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.
    
 0.965
LOC103722808
LOW QUALITY PROTEIN: protein NAR1; Belongs to the NARF family.
    
 0.923
LOC103718149
LOW QUALITY PROTEIN: general transcription and DNA repair factor IIH helicase subunit XPD.
    
 0.625
LOC103701170
Fanconi anemia group J protein homolog.
    
 0.625
LOC103710895
ATP-dependent DNA helicase DDX11.
    
 0.625
LOC103695703
Regulator of telomere elongation helicase 1 homolog.
    
 0.625
LOC103704737
DNA replication ATP-dependent helicase/nuclease DNA2.
    
 0.579
LOC103723460
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
      
 0.426
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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