STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103702807Uncharacterized endoplasmic reticulum membrane protein YGL010W. (193 aa)    
Predicted Functional Partners:
LOC103707807
Uncharacterized protein LOC103707807 isoform X1.
      
 0.561
LOC103700277
EG45-like domain containing protein.
      
 0.430
LOC103712803
Probable protein phosphatase 2C 39 isoform X1.
      
 0.422
LOC103718620
Probable protein phosphatase 2C 40 isoform X1.
      
 0.422
LOC103696298
Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3.
      
 0.416
LOC103717675
LOW QUALITY PROTEIN: leucine-rich repeat receptor-like tyrosine-protein kinase PXC3.
      
 0.416
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.