STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103702887Bifunctional riboflavin kinase/FMN phosphatase-like isoform X1. (381 aa)    
Predicted Functional Partners:
LOC103718953
Riboflavin synthase.
  
 
 0.982
LOC103715390
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
 
 0.960
LOC103720103
FAD synthetase, chloroplastic-like isoform X1.
     
 0.949
LOC103717961
Nudix hydrolase 23, chloroplastic-like.
  
 
 0.941
LOC103723373
Nudix hydrolase 23, chloroplastic-like isoform X1.
  
 
 0.941
LOC103708543
Flavin mononucleotide hydrolase 1, chloroplatic isoform X1.
  
 0.936
LOC103705812
Purple acid phosphatase 17.
  
 
 0.914
LOC103711104
Purple acid phosphatase.
  
 
 0.914
LOC103713258
Purple acid phosphatase.
  
 
 0.914
LOC103724324
Bifunctional riboflavin kinase/FMN phosphatase-like.
  
  
0.914
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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