STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103703076Proteinaceous RNase P 2. (539 aa)    
Predicted Functional Partners:
LOC103721013
Ribonucleases P/MRP protein subunit POP1 isoform X1.
   
 
 0.943
LOC103702912
Uncharacterized protein LOC103702912.
   
 
 0.940
LOC103722396
Uncharacterized protein LOC103722396 isoform X1.
     
 0.916
LOC103696071
Proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1.
  
  
 
0.903
LOC103702617
Proteinaceous RNase P 1, chloroplastic/mitochondrial-like.
  
  
 
0.902
LOC103708506
Probable ribonuclease P/MRP protein subunit POP5.
     
  0.900
LOC103718440
tRNA (Guanine(9)-N1)-methyltransferase.
   
 0.453
LOC103721734
Violaxanthin de-epoxidase, chloroplastic; Belongs to the calycin superfamily. Lipocalin family.
   
    0.433
LOC103721419
LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g04810, chloroplastic.
      
 0.412
LOC103721787
Pentatricopeptide repeat-containing protein At3g06430, chloroplastic.
      
 0.400
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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