STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103703387Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family. (190 aa)    
Predicted Functional Partners:
LOC103705179
Vacuolar protein sorting-associated protein 26B isoform X1.
   
 0.970
LOC103711668
Vacuolar protein sorting-associated protein 26B-like isoform X1.
   
 0.970
LOC103714634
Uncharacterized protein LOC103714634 isoform X1.
   
 0.959
LOC103720101
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.959
LOC103724131
Misshapen-like kinase 1.
   
 0.959
LOC103717733
Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
  
 0.911
LOC103717757
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
  
  
 
0.900
LOC103701861
Down syndrome critical region protein 3 homolog isoform X1.
   
 
 0.870
LOC103701476
TBC1 domain family member 5 homolog A-like isoform X1.
    
 
 0.866
LOC103713096
Uncharacterized protein LOC103713096.
    
 
 0.866
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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