STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103703711Fanconi anemia group I protein isoform X1. (1413 aa)    
Predicted Functional Partners:
LOC103705740
Fanconi anemia group D2 protein homolog.
  
 0.994
LOC103704265
E3 ubiquitin-protein ligase FANCL isoform X1.
  
 
 0.991
LOC103722729
Protein TIFY 4A-like isoform X1.
   
 0.989
LOC103710558
WD repeat-containing protein 48-like isoform X1.
    
 0.953
LOC103696637
WD repeat-containing protein 48-like.
    
 0.953
LOC103717938
Uncharacterized protein LOC103717938.
    
 0.953
LOC103697899
ubiquitin-60S ribosomal protein L40.
    
  0.950
LOC103709637
ubiquitin-40S ribosomal protein S27a-like.
    
  0.939
LOC103701036
ubiquitin-40S ribosomal protein S27a.
    
  0.939
LOC103696584
ubiquitin-40S ribosomal protein S27a-like isoform X1.
    
  0.939
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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