STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103703780Protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5-like. (392 aa)    
Predicted Functional Partners:
LOC103702836
Photosynthetic NDH subunit of subcomplex B 4, chloroplastic isoform X1.
   
  
 0.533
LOC103695762
Photosynthetic NDH subunit of subcomplex B 5, chloroplastic.
   
  
 0.530
LOC103711139
Dihydrodipicolinate reductase-like protein CRR1, chloroplastic isoform X1.
   
  
 0.473
LOC103718208
Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic.
   
  
 0.473
LOC103707881
Peptidylprolyl isomerase.
   
  
 0.458
LOC103712714
NAD(P)H-quinone oxidoreductase subunit U, chloroplastic.
   
  
 0.442
LOC113460904
NAD(P)H-quinone oxidoreductase subunit T, chloroplastic isoform X1.
   
  
 0.441
LOC103717288
Photosynthetic NDH subunit of subcomplex B 3, chloroplastic isoform X1.
   
  
 0.439
LOC103698435
LOW QUALITY PROTEIN: photosynthetic NDH subunit of lumenal location 3, chloroplastic-like.
   
  
 0.436
LOC103722715
Photosynthetic NDH subunit of subcomplex B 3, chloroplastic isoform X1.
   
  
 0.423
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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