STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103703844Protein POOR HOMOLOGOUS SYNAPSIS 1. (333 aa)    
Predicted Functional Partners:
LOC103724315
RNA polymerase II C-terminal domain phosphatase-like; This promotes the activity of RNA polymerase II.
      
 0.560
LOC103696112
Protein PARTING DANCERS.
      
 0.526
LOC103705368
Protein gamma response 1 isoform X1.
      
 0.516
LOC103722045
Protein MULTIPOLAR SPINDLE 1 isoform X1.
      
 0.501
LOC103710385
Sister chromatid cohesion 1 protein 1.
      
 0.444
LOC103702062
Type 2 DNA topoisomerase 6 subunit B-like.
      
 0.433
LOC103708853
Uncharacterized protein LOC103708853.
      
 0.431
LOC113460951
LOW QUALITY PROTEIN: protein PRD1.
      
 0.431
LOC103695982
Protein PAIR1.
      
 0.420
LOC103711417
Dual specificity protein phosphatase PHS1-like.
      
 0.416
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.