LOC103703936 protein (Phoenix dactylifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103703936

Exportin-4. (1170 aa)

Predicted Functional Partners:

LOC103696274

0.739

LOC103705232

0.739

LOC103707400

0.739

LOC103707794

0.739

LOC103714249

0.739

LOC113462326

0.739

LOC103706255

0.703

LOC103724297

0.703

LOC103696370

0.643

LOC103704121

0.590

Your Current Organism:

Phoenix dactylifera

NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103696274	LOC103703936	A0A2H3WZK7	A0A2H3XKU3	Eukaryotic translation initiation factor 5A.	Exportin-4.	0.739
LOC103696274	LOC103704121	A0A2H3WZK7	A0A2H3XLD8	Eukaryotic translation initiation factor 5A.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.410
LOC103696370	LOC103703936	A0A2H3WZT8	A0A2H3XKU3	Exportin-7 isoform X1.	Exportin-4.	0.643
LOC103703936	LOC103696274	A0A2H3XKU3	A0A2H3WZK7	Exportin-4.	Eukaryotic translation initiation factor 5A.	0.739
LOC103703936	LOC103696370	A0A2H3XKU3	A0A2H3WZT8	Exportin-4.	Exportin-7 isoform X1.	0.643
LOC103703936	LOC103704121	A0A2H3XKU3	A0A2H3XLD8	Exportin-4.	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	0.590
LOC103703936	LOC103705232	A0A2H3XKU3	A0A2H3XQ16	Exportin-4.	Eukaryotic translation initiation factor 5A.	0.739
LOC103703936	LOC103706255	A0A2H3XKU3	A0A2H3XTH1	Exportin-4.	Uncharacterized protein LOC103706255.	0.703
LOC103703936	LOC103707400	A0A2H3XKU3	A0A2H3XXN8	Exportin-4.	Eukaryotic translation initiation factor 5A.	0.739
LOC103703936	LOC103707794	A0A2H3XKU3	A0A2H3XYG4	Exportin-4.	Eukaryotic translation initiation factor 5A.	0.739
LOC103703936	LOC103714249	A0A2H3XKU3	A0A2H3YJC1	Exportin-4.	Eukaryotic translation initiation factor 5A-2-like.	0.739
LOC103703936	LOC103724297	A0A2H3XKU3	A0A2H3ZHU3	Exportin-4.	Uncharacterized protein LOC103724297 isoform X1.	0.703
LOC103703936	LOC113462326	A0A2H3XKU3	A0A3Q0HWY3	Exportin-4.	Eukaryotic translation initiation factor 5A.	0.739
LOC103704121	LOC103696274	A0A2H3XLD8	A0A2H3WZK7	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Eukaryotic translation initiation factor 5A.	0.410
LOC103704121	LOC103703936	A0A2H3XLD8	A0A2H3XKU3	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Exportin-4.	0.590
LOC103704121	LOC103705232	A0A2H3XLD8	A0A2H3XQ16	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Eukaryotic translation initiation factor 5A.	0.410
LOC103704121	LOC103706255	A0A2H3XLD8	A0A2H3XTH1	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Uncharacterized protein LOC103706255.	0.410
LOC103704121	LOC103707400	A0A2H3XLD8	A0A2H3XXN8	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Eukaryotic translation initiation factor 5A.	0.410
LOC103704121	LOC103707794	A0A2H3XLD8	A0A2H3XYG4	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Eukaryotic translation initiation factor 5A.	0.410
LOC103704121	LOC103714249	A0A2H3XLD8	A0A2H3YJC1	Delta-1-pyrroline-5-carboxylate synthase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants; In the N-terminal section; belongs to the glutamate 5- kinase family.	Eukaryotic translation initiation factor 5A-2-like.	0.410