STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103704026Zinc finger CCCH domain-containing protein 25 isoform X1. (320 aa)    
Predicted Functional Partners:
LOC103714024
BUD13 homolog.
   
 0.993
LOC103697261
FHA domain-containing protein DDL-like.
   
 0.982
LOC103703473
FHA domain-containing protein DDL-like isoform X1.
   
 0.982
LOC103719116
PHD finger-like domain-containing protein 5B.
    
 
 0.970
LOC103719620
Splicing factor 3B subunit 1.
    
 
 0.969
LOC103698069
Splicing factor 3B subunit 2-like.
    
 
 0.966
LOC103696709
Serine/arginine repetitive matrix protein 2.
   
 
 0.965
LOC103723728
LOW QUALITY PROTEIN: SNW/SKI-interacting protein A-like.
    
 
 0.964
LOC103697458
Splicing factor 3A subunit 2.
    
 
 0.959
LOC103721043
Peptidyl-prolyl cis-trans isomerase CYP57.
   
 0.959
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.