STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103704252COMPASS-like H3K4 histone methylase component WDR5A. (332 aa)    
Predicted Functional Partners:
LOC103696185
Chromatin structure-remodeling complex protein SYD-like.
   
 0.557
LOC103717336
Chromatin structure-remodeling complex protein SYD-like isoform X1.
   
 0.557
LOC103723358
Chromatin structure-remodeling complex protein SYD-like.
   
 0.557
LOC103705084
Protein TRAUCO-like.
    
 0.513
LOC103719216
Protein TRAUCO-like.
    
 0.513
LOC103714463
Microfibrillar-associated protein 1-like.
 
  
   0.484
LOC103704334
Serine/threonine-protein kinase ATG1t.
    
 0.455
LOC103707483
Histone-lysine N-methyltransferase SUVR5 isoform X1.
   
 0.452
LOC103716575
Ankyrin-1.
    
 0.450
LOC103704112
elongin-C; Belongs to the SKP1 family.
    
 0.436
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.