STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103704521Chitinase 2-like; Belongs to the glycosyl hydrolase 18 family. (301 aa)    
Predicted Functional Partners:
cox2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
    
 0.730
cox3
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
    
 0.723
LOC103695470
Cytochrome c oxidase subunit 5b-1, mitochondrial-like.
   
 0.564
LOC103703916
Cytochrome c oxidase subunit 5b-2, mitochondrial-like.
   
 0.564
LOC103721271
Cytochrome c oxidase subunit 5b-1, mitochondrial-like.
   
 0.564
LOC103698132
Uncharacterized protein LOC103698132.
  
   
 0.526
LOC103696908
Cytochrome c oxidase subunit 6a, mitochondrial isoform X1; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.512
LOC103707633
Cytochrome c oxidase subunit 6a, mitochondrial-like; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.512
LOC103704262
Cytochrome c oxidase subunit 6a, mitochondrial-like.
   
 0.512
LOC103709262
S phase cyclin A-associated protein in the endoplasmic reticulum-like isoform X1.
  
     0.510
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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