STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103704528Syntaxin-32-like isoform X1; Belongs to the syntaxin family. (338 aa)    
Predicted Functional Partners:
LOC103722759
Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 0.996
LOC103699104
Bet1-like SNARE 1-1 isoform X1.
   
 0.995
LOC103705471
Bet1-like SNARE 1-1.
   
 0.995
LOC103715460
Bet1-like SNARE 1-1.
   
 0.995
LOC103703167
VAMP-like protein YKT61; Belongs to the synaptobrevin family.
    
 0.993
LOC103704351
VAMP-like protein YKT61; Belongs to the synaptobrevin family.
    
 0.993
LOC103710080
25.3 kDa vesicle transport protein; Belongs to the synaptobrevin family.
   
 0.991
LOC103698455
25.3 kDa vesicle transport protein; Belongs to the synaptobrevin family.
   
 0.991
LOC103710405
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.988
LOC103710717
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.988
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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