STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103704560Calcium-dependent protein kinase 20-like. (532 aa)    
Predicted Functional Partners:
LOC103709004
Respiratory burst oxidase homolog protein A.
   
 
 0.663
LOC103712358
Respiratory burst oxidase homolog protein C.
   
 
 0.663
LOC103715104
Respiratory burst oxidase homolog protein B-like.
   
 
 0.663
LOC103708281
Respiratory burst oxidase homolog protein F-like.
   
 
 0.663
LOC103712595
Respiratory burst oxidase homolog protein E.
   
 
 0.663
LOC103720078
Respiratory burst oxidase homolog protein B-like isoform X4.
   
 
 0.663
LOC103720658
Calcium-binding protein CP1-like.
   
 0.535
LOC103701140
Calcium-binding protein CP1-like.
   
 0.535
LOC103718823
Probable calcium-binding protein CML30.
   
 0.484
LOC103702537
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1.
   
0.426
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.